Structure: Python module is now standalone (setup.py generated by cmake). Better directory hierarchy

CMakeLists.txt

@@ -17,17 +17,42 @@ if(CUDA_FOUND)
    include_directories(${CUDA_INCLUDE_DIRS})
 endif()
 
-ADD_DEFINITIONS(-Wno-sign-compare -D__CL_ENABLE_EXCEPTIONS ${BACKEND_DEFINES} -Wall -Wextra -pedantic -std=c++11)
+add_definitions(-Wno-sign-compare -D__CL_ENABLE_EXCEPTIONS ${BACKEND_DEFINES} -Wall -Wextra -pedantic -std=c++11)
-ADD_EXECUTABLE(bin2cpp ${CMAKE_MODULE_PATH}/bin2cpp.cpp)
+add_executable(bin2cpp ${CMAKE_MODULE_PATH}/helpers/bin2cpp.cpp)
-
-include(CTest)
 
 file(GLOB_RECURSE LIBISAAC_SRC lib/*.cpp)
+
+#Python wrapper
+set(SETUP_PY_IN "${CMAKE_MODULE_PATH}/python/setup.py")
+set(SETUP_PY    "${CMAKE_SOURCE_DIR}/python/setup.py")
+
+set(LIBISAAC_SRC_STR)
+foreach(FILE ${LIBISAAC_SRC})
+    string(REPLACE "${CMAKE_CURRENT_SOURCE_DIR}" "src" _TMP ${FILE})
+    set(LIBISAAC_SRC_STR "${_TMP} ${LIBISAAC_SRC_STR}")
+endforeach()
+
+set(INCLUDE_DIRECTORIES_STR)
+get_property(INCLUDE_DIRECTORIES_LST DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} PROPERTY INCLUDE_DIRECTORIES)
+set(INCLUDE_DIRECTORIES_STR)
+foreach(FILE ${INCLUDE_DIRECTORIES_LST})
+    string(REPLACE "${CMAKE_CURRENT_SOURCE_DIR}" "src" _TMP ${FILE})
+    set(INCLUDE_DIRECTORIES "${INCLUDE_DIRECTORIES} ${_TMP}")
+endforeach()
+
+configure_file(${SETUP_PY_IN} ${SETUP_PY})
+add_custom_command(OUTPUT "${CMAKE_BINARY_DIR}/build/timestamp"
+                    COMMAND ${CMAKE_COMMAND} -E remove_directory ${CMAKE_SOURCE_DIR}/python/src/lib
+                    COMMAND ${CMAKE_COMMAND} -E remove_directory ${CMAKE_SOURCE_DIR}/python/src/include
+
+                    COMMAND ${CMAKE_COMMAND} -E copy_directory ${CMAKE_SOURCE_DIR}/lib ${CMAKE_SOURCE_DIR}/python/src/lib
+                    COMMAND ${CMAKE_COMMAND} -E copy_directory ${CMAKE_SOURCE_DIR}/include ${CMAKE_SOURCE_DIR}/python/src/include)
+add_custom_target(package-python ALL DEPENDS "${CMAKE_BINARY_DIR}/build/timestamp")
+
+
+#Isaac
+include(CTest)
+
 add_subdirectory(lib)
 add_subdirectory(tests)
 add_subdirectory(bench)
-find_program(PYTHON "python")
-if(PYTHON)
-    add_subdirectory(python)
-    #add_subdirectory(tune)
-endif()

cmake/apk.cmake

@@ -1,259 +0,0 @@
-#*********************************************************#
-#*  File: Apk.cmake                                      *
-#*    Android apk tools
-#*
-#*  Copyright (C) 2002-2013 The PixelLight Team (http://www.pixellight.org/)
-#*
-#*  This file is part of PixelLight.
-#*
-#*  Permission is hereby granted, free of charge, to any person obtaining a copy of this software
-#*  and associated documentation files (the "Software"), to deal in the Software without
-#*  restriction, including without limitation the rights to use, copy, modify, merge, publish,
-#*  distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the
-#*  Software is furnished to do so, subject to the following conditions:
-#*
-#*  The above copyright notice and this permission notice shall be included in all copies or
-#*  substantial portions of the Software.
-#*
-#*  THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING
-#*  BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
-#*  NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
-#*  DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
-#*  FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
-#*********************************************************#
-
-
-##################################################
-## Options
-##################################################
-set(ANDROID_APK_CREATE				"1"							CACHE BOOL		"Create apk file?")
-set(ANDROID_APK_INSTALL				"1"							CACHE BOOL		"Install created apk file on the device automatically?")
-set(ANDROID_APK_RUN					"1"							CACHE BOOL		"Run created apk file on the device automatically? (installs it automatically as well, \"ANDROID_APK_INSTALL\"-option is ignored)")
-set(ANDROID_APK_TOP_LEVEL_DOMAIN	"org"						CACHE STRING	"Top level domain name of the organization (follow the package naming conventions (http://en.wikipedia.org/wiki/Java_package#Package_naming_conventions))")
-set(ANDROID_APK_DOMAIN				"pixellight"				CACHE STRING	"Organization's domain (follow the package naming conventions (http://en.wikipedia.org/wiki/Java_package#Package_naming_conventions))")
-set(ANDROID_APK_SUBDOMAIN			"test"						CACHE STRING	"Any subdomains (follow the package naming conventions (http://en.wikipedia.org/wiki/Java_package#Package_naming_conventions))")
-set(ANDROID_APK_FULLSCREEN			"1"							CACHE BOOL		"Run the application in fullscreen? (no status/title bar)")
-set(ANDROID_APK_RELEASE				"0"							CACHE BOOL		"Create apk file ready for release? (signed, you have to enter a password during build, do also setup \"ANDROID_APK_SIGNER_KEYSTORE\" and \"ANDROID_APK_SIGNER_ALIAS\")")
-set(ANDROID_APK_SIGNER_KEYSTORE		"~/my-release-key.keystore"	CACHE STRING	"Keystore for signing the apk file (only required for release apk)")
-set(ANDROID_APK_SIGNER_ALIAS		"myalias"					CACHE STRING	"Alias for signing the apk file (only required for release apk)")
-
-
-##################################################
-## Variables
-##################################################
-set(ANDROID_THIS_DIRECTORY ${CMAKE_CURRENT_LIST_DIR})	# Directory this CMake file is in
-
-
-##################################################
-## MACRO: android_create_apk
-##
-## Create/copy Android apk related files
-##
-## @param name
-##   Name of the project (e.g. "MyProject"), this will also be the name of the created apk file
-## @param apk_directory
-##   Directory were to construct the apk file in (e.g. "${CMAKE_BINARY_DIR}/apk")
-## @param shared_libraries
-##   List of shared libraries (absolute filenames) this application is using, these libraries are copied into the apk file and will be loaded automatically within a generated Java file - Lookout! The order is important due to shared library dependencies!
-## @param assets
-##   List of assets to copy into the apk file (absolute filenames, wildcards like "*.*" are allowed)
-## @param data_directory
-##   Subdirectory within the apk asset directory to copy the "assets"-files into (e.g. "Data")
-##
-## @remarks
-##   Requires the following tools to be found automatically
-##   - "android" (part of the Android SDK)
-##   - "adb" (part of the Android SDK)
-##   - "ant" (type e.g. "sudo apt-get install ant" on your Linux system to install Ant)
-##   - "jarsigner" (part of the JDK)
-##   - "zipalign" (part of the Android SDK)
-##################################################
-macro(android_create_apk name apk_directory shared_libraries assets data_directory)
-	if(ANDROID_APK_CREATE)
-		# Construct the current package name and theme
-		set(ANDROID_APK_PACKAGE "${ANDROID_APK_TOP_LEVEL_DOMAIN}.${ANDROID_APK_DOMAIN}.${ANDROID_APK_SUBDOMAIN}")
-		if(ANDROID_APK_FULLSCREEN)
-			set(ANDROID_APK_THEME "android:theme=\"@android:style/Theme.NoTitleBar.Fullscreen\"")
-		else()
-			set(ANDROID_APK_THEME "")
-		endif()
-		set(ANDROID_NAME ${name})
-		if(CMAKE_BUILD_TYPE MATCHES Debug)
-			set(ANDROID_APK_DEBUGGABLE "true")
-			set(ANDROID_APK_RELEASE_LOCAL "0")
-		else()
-			set(ANDROID_APK_DEBUGGABLE "false")
-			set(ANDROID_APK_RELEASE_LOCAL ${ANDROID_APK_RELEASE})
-		endif()
-
-		# Create "AndroidManifest.xml"
-		configure_file("${CMAKE_CURRENT_SOURCE_DIR}/android/AndroidManifest.xml.in" "${apk_directory}/AndroidManifest.xml")
-
-		# Create "res/values/strings.xml"
-		configure_file("${CMAKE_CURRENT_SOURCE_DIR}/android/strings.xml.in" "${apk_directory}/res/values/strings.xml")
-
-		# Get a list of libraries to load in (e.g. "PLCore;PLMath" etc.)
-		set(ANDROID_SHARED_LIBRARIES_TO_LOAD "")
-		foreach(value ${shared_libraries})
-			# "value" is e.g. "/home/cofenberg/pl_ndk/Bin-Linux-ndk/Runtime/armeabi/libPLCore.so"
-			get_filename_component(shared_library_filename ${value} NAME_WE)
-
-			# "shared_library_filename" is e.g. "libPLCore", but we need "PLCore"
-			string(LENGTH ${shared_library_filename} shared_library_filename_length)
-			math(EXPR shared_library_filename_length ${shared_library_filename_length}-3)
-			string(SUBSTRING ${shared_library_filename} 3 ${shared_library_filename_length} shared_library_filename)
-
-			# "shared_library_filename" is now e.g. "PLCore", this is what we want -> Add it to the list
-			set(ANDROID_SHARED_LIBRARIES_TO_LOAD ${ANDROID_SHARED_LIBRARIES_TO_LOAD} ${shared_library_filename})
-		endforeach()
-
-		# Create Java file which is responsible for loading in the required shared libraries (the content of "ANDROID_SHARED_LIBRARIES_TO_LOAD" is used for this)
-		configure_file("${CMAKE_CURRENT_SOURCE_DIR}/android/LoadLibraries.java.in" "${apk_directory}/src/${ANDROID_APK_TOP_LEVEL_DOMAIN}/${ANDROID_APK_DOMAIN}/${ANDROID_APK_SUBDOMAIN}/LoadLibraries.java")
-
-		# Create the directory for the libraries
- 		add_custom_command(TARGET ${ANDROID_NAME}
-			PRE_BUILD
-			COMMAND ${CMAKE_COMMAND} -E remove_directory "${apk_directory}/libs"
-		)
-		add_custom_command(TARGET ${ANDROID_NAME}
-			PRE_BUILD
-			COMMAND ${CMAKE_COMMAND} -E make_directory "${apk_directory}/libs/${ARM_TARGET}"
-		)
-
-		# Copy the used shared libraries
-		foreach(value ${shared_libraries})
-			add_custom_command(TARGET ${ANDROID_NAME}
-				POST_BUILD
-				COMMAND ${CMAKE_COMMAND} -E copy ${value} "${apk_directory}/libs/${ARM_TARGET}"
-			)
-		endforeach()
-
-		# Create "build.xml", "default.properties", "local.properties" and "proguard.cfg" files
-		add_custom_command(TARGET ${ANDROID_NAME}
-			COMMAND android update project -t android-${ANDROID_API_LEVEL} --name ${ANDROID_NAME} --path "${apk_directory}"
-		)
-
-		# Copy assets
-		add_custom_command(TARGET ${ANDROID_NAME}
-			PRE_BUILD
-			COMMAND ${CMAKE_COMMAND} -E remove_directory "${apk_directory}/assets"
-		)
-		add_custom_command(TARGET ${ANDROID_NAME}
-			PRE_BUILD
-			COMMAND ${CMAKE_COMMAND} -E make_directory "${apk_directory}/assets/${data_directory}"
-		)
-		#foreach(value ${assets})
-		#	android_copy_files(${value} "${apk_directory}/assets/${data_directory}")
-		#endforeach()
-
-		# In case of debug build, do also copy gdbserver
-		#if(CMAKE_BUILD_TYPE MATCHES Debug)
-		#	add_custom_command(TARGET ${ANDROID_NAME}
-		#		POST_BUILD
-		#		COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_GDBSERVER} "${apk_directory}/libs/${ARM_TARGET}"
-		#	)
-		#endif()
-
-		# Uninstall previous version from the device/emulator (else we may get e.g. signature conflicts)
-		add_custom_command(TARGET ${ANDROID_NAME}
-			COMMAND adb uninstall ${ANDROID_APK_PACKAGE}
-		)
-
-		# Build the apk file
-		if(ANDROID_APK_RELEASE_LOCAL)
-			# Let Ant create the unsigned apk file
-			add_custom_command(TARGET ${ANDROID_NAME}
-				COMMAND ant release
-				WORKING_DIRECTORY "${apk_directory}"
-			)
-
-			# Sign the apk file
-			add_custom_command(TARGET ${ANDROID_NAME}
-				COMMAND jarsigner -verbose -keystore ${ANDROID_APK_SIGNER_KEYSTORE} bin/${ANDROID_NAME}-unsigned.apk ${ANDROID_APK_SIGNER_ALIAS}
-				WORKING_DIRECTORY "${apk_directory}"
-			)
-
-			# Align the apk file
-			add_custom_command(TARGET ${ANDROID_NAME}
-				COMMAND zipalign -v -f 4 bin/${ANDROID_NAME}-unsigned.apk bin/${ANDROID_NAME}.apk
-				WORKING_DIRECTORY "${apk_directory}"
-			)
-
-			# Install current version on the device/emulator
-			if(ANDROID_APK_INSTALL OR ANDROID_APK_RUN)
-				add_custom_command(TARGET ${ANDROID_NAME}
-					COMMAND adb install -r bin/${ANDROID_NAME}.apk
-					WORKING_DIRECTORY "${apk_directory}"
-				)
-			endif()
-		else()
-			# Let Ant create the unsigned apk file
-			add_custom_command(TARGET ${ANDROID_NAME}
-				COMMAND ant debug
-				WORKING_DIRECTORY "${apk_directory}"
-			)
-
-			# Install current version on the device/emulator
-			if(ANDROID_APK_INSTALL OR ANDROID_APK_RUN)
-				add_custom_command(TARGET ${ANDROID_NAME}
-					COMMAND adb install -r bin/${ANDROID_NAME}-debug.apk
-					WORKING_DIRECTORY "${apk_directory}"
-				)
-			endif()
-		endif()
-
-		# Start the application
-		if(ANDROID_APK_RUN)
-			add_custom_command(TARGET ${ANDROID_NAME}
-				COMMAND adb shell am start -n ${ANDROID_APK_PACKAGE}/${ANDROID_APK_PACKAGE}.LoadLibraries
-			)
-		endif()
-	endif()
-endmacro(android_create_apk name apk_directory shared_libraries assets data_directory)
-
-##################################################
-## MACRO: android_copy_files
-##
-## Copy files from one place to another using wildcards
-##################################################
-macro(android_copy_files src dest)
-	# Get path
-	get_filename_component(path ${src} PATH)
-
-	# Get exclude option
-	set(exclude)
-	if("${ARGV2}" STREQUAL "EXCLUDE")
-		set(exclude ${ARGV3})
-	endif()
-
-	# Find files
-	file(GLOB_RECURSE files RELATIVE ${path} ${src})
-
-	# Find files
-	foreach(file ${files})
-		# Get source and destination file
-		set(src_file ${path}/${file})
-		set(dst_file ${dest}/${file})
-
-		# Check exclude expression
-		set(copy 1)
-		if(exclude)
-			if(file MATCHES ${exclude})
-				set(copy 0)
-			endif()
-		endif()
-
-		# Process file
-		if(copy EQUAL 1)
-			# Create output directory
-			get_filename_component(dst_path ${dst_file} PATH)
-			file(MAKE_DIRECTORY ${dst_path})
-
-			# Copy file
-			add_custom_command(TARGET ${ANDROID_NAME}
-				PRE_BUILD
-				COMMAND ${CMAKE_COMMAND} -E copy ${src_file} ${dst_file} VERBATIM
-			)
-		endif()
-	endforeach(file ${files})
-endmacro(android_copy_files src dest)

cmake/python/setup.py

@@ -54,17 +54,12 @@ def main():
     cvars["LDFLAGS"] = '-Wl,--no-as-needed ' + cvars["LDFLAGS"]
 
     #Includes
-    include ='${INCLUDE_DIRECTORIES_STR}'.split() +\
+    include ='${INCLUDE_DIRECTORIES_STR}'.split() + ['external/boost/include', os.path.join(find_module("numpy")[1], "core", "include")]
-                    ['${CMAKE_CURRENT_SOURCE_DIR}/external/boost/include',
-                      os.path.join(find_module("numpy")[1], "core", "include")]
-
     #Sources
-    src =  '${LIBISAAC_SRC_STR}'.split() +\
+    src =  '${LIBISAAC_SRC_STR}'.split() + [os.path.join('src', 'wrap', sf)  for sf in ['_isaac.cpp', 'core.cpp', 'driver.cpp', 'model.cpp', 'exceptions.cpp']]
-            [os.path.join('${CMAKE_CURRENT_SOURCE_DIR}', 'src', sf) \
+    boostsrc = 'external/boost/libs/'
-                for sf in ['_isaac.cpp', 'core.cpp', 'driver.cpp', 'model.cpp', 'exceptions.cpp']]
-    boostsrc = '${CMAKE_CURRENT_SOURCE_DIR}/external/boost/libs/'
     for s in ['numpy','python','smart_ptr','system','thread']:
-        src = src + [x for x in recursive_glob('${CMAKE_CURRENT_SOURCE_DIR}/external/boost/libs/' + s + '/src/','.cpp') if 'win32' not in x and 'pthread' not in x]
+        src = src + [x for x in recursive_glob('external/boost/libs/' + s + '/src/','.cpp') if 'win32' not in x and 'pthread' not in x]
     # make sure next line succeeds even on Windows
     src = [f.replace("\\", "/") for f in src]
     if sys.platform == "win32":
@@ -83,7 +78,6 @@ def main():
                 author_email='ptillet@g.harvard.edu',
                 license='MPL 2.0',
                 packages=["isaac"],
-                package_dir={ '': '${CMAKE_CURRENT_BINARY_DIR}' },
                 ext_package="isaac",
                 ext_modules=[Extension(
                     '_isaac',src,

python/CMakeLists.txt

@@ -2,13 +2,13 @@ file( GLOB_RECURSE PYTHON_SRC *.cpp)
 file( GLOB_RECURSE PYTHON_PYSRC *.py)
 add_custom_target( MAKE_PYTHON_SRC_VISIBLE SOURCES ${PYTHON_SRC} ${PYTHON_PYSRC})
 
-set(SETUP_PY_IN "${CMAKE_CURRENT_SOURCE_DIR}/external/cmake/setup.py")
+set(SETUP_PY_IN "${CMAKE_MODULES_PATH}/python/setup.py")
 set(SETUP_PY    "${CMAKE_CURRENT_SOURCE_DIR}/setup.py")
 set(OUTPUT      "${CMAKE_CURRENT_BINARY_DIR}/build")
 
 function(JOIN VALUES GLUE OUTPUT)
   string (REGEX REPLACE "([^\\]|^);" "\\1${GLUE}" _TMP_STR "${VALUES}")
-  string (REGEX REPLACE "[\\](.)" "\\1" _TMP_STR "${_TMP_STR}") #fixes escaping
+  string (REGEX REPLACE "[\\](.)" "\\1" _TMP_STR "${_TMP_STR}")
   set (${OUTPUT} "${_TMP_STR}" PARENT_SCOPE)
 endfunction()
 join("${LIBISAAC_SRC}" " " LIBISAAC_SRC_STR)

python/setup.py

@@ -0,0 +1,110 @@
+#Thanks to Andreas Knoeckler for providing stand-alone boost.python
+#through PyOpenCL and PyCUDA
+
+import os, sys
+from distutils.command.build_ext import build_ext
+from distutils.command.build_py import build_py
+from distutils.core import setup, Extension
+from distutils.sysconfig import get_python_inc
+from distutils import sysconfig
+from imp import find_module
+from glob import glob
+
+platform_cflags = {}
+platform_ldflags = {}
+platform_libs = {}
+
+class build_ext_subclass(build_ext):
+    def build_extensions(self):
+        c = self.compiler.compiler_type
+        if c in platform_cflags.keys():
+            for e in self.extensions:
+                e.extra_compile_args = platform_cflags[c]
+        if c in platform_ldflags.keys():
+            for e in self.extensions:
+                e.extra_link_args = platform_ldflags[c]
+        if c in platform_libs.keys():
+            for e in self.extensions:
+                try:
+                    e.libraries += platform_libs[c]
+                except:
+                    e.libraries = platform_libs[c]
+        build_ext.build_extensions(self)
+
+def main():
+
+    def recursive_glob(rootdir='.', suffix=''):
+        return [os.path.join(looproot, filename)
+                for looproot, _, filenames in os.walk(rootdir)
+                for filename in filenames if filename.endswith(suffix)]
+
+    def remove_prefixes(optlist, bad_prefixes):
+        for bad_prefix in bad_prefixes:
+            for i, flag in enumerate(optlist):
+                if flag.startswith(bad_prefix):
+                    optlist.pop(i)
+                    break
+        return optlist
+
+    #Compiler options
+    cvars = sysconfig.get_config_vars()
+    cvars['BASECFLAGS'] = "-D__CL_ENABLE_EXCEPTIONS -fPIC -Wno-sign-compare -Wall -Wextra -pedantic -Wno-ignored-qualifiers -std=c++11 "
+    cvars['OPT'] = str.join(' ', remove_prefixes(cvars['OPT'].split(), ['-g', '-Wstrict-prototypes']))
+    cvars["CFLAGS"] = cvars["BASECFLAGS"] + " " + cvars["OPT"]
+    cvars["LDFLAGS"] = '-Wl,--no-as-needed ' + cvars["LDFLAGS"]
+
+    #Includes
+    include =''.split() + ['external/boost/include', os.path.join(find_module("numpy")[1], "core", "include")]
+    #Sources
+    src =  'src/lib/exception/unknown_datatype.cpp src/lib/exception/operation_not_supported.cpp src/lib/array.cpp src/lib/backend/parse.cpp src/lib/backend/templates/mreduction.cpp src/lib/backend/templates/maxpy.cpp src/lib/backend/templates/mproduct.cpp src/lib/backend/templates/reduction.cpp src/lib/backend/templates/vaxpy.cpp src/lib/backend/templates/base.cpp src/lib/backend/keywords.cpp src/lib/backend/stream.cpp src/lib/backend/binder.cpp src/lib/backend/mapped_object.cpp src/lib/model/model.cpp src/lib/model/predictors/random_forest.cpp src/lib/value_scalar.cpp src/lib/driver/check.cpp src/lib/driver/program.cpp src/lib/driver/platform.cpp src/lib/driver/kernel.cpp src/lib/driver/ndrange.cpp src/lib/driver/event.cpp src/lib/driver/command_queue.cpp src/lib/driver/backend.cpp src/lib/driver/context.cpp src/lib/driver/handle.cpp src/lib/driver/buffer.cpp src/lib/driver/device.cpp src/lib/symbolic/execute.cpp src/lib/symbolic/io.cpp src/lib/symbolic/detect.cpp src/lib/symbolic/expression.cpp '.split() + [os.path.join('src', 'wrap', sf)  for sf in ['_isaac.cpp', 'core.cpp', 'driver.cpp', 'model.cpp', 'exceptions.cpp']]
+    boostsrc = 'external/boost/libs/'
+    for s in ['numpy','python','smart_ptr','system','thread']:
+        src = src + [x for x in recursive_glob('external/boost/libs/' + s + '/src/','.cpp') if 'win32' not in x and 'pthread' not in x]
+    # make sure next line succeeds even on Windows
+    src = [f.replace("\\", "/") for f in src]
+    if sys.platform == "win32":
+        src += glob(boostsrc + "/thread/src/win32/*.cpp")
+        src += glob(boostsrc + "/thread/src/tss_null.cpp")
+    else:
+        src += glob(boostsrc + "/thread/src/pthread/*.cpp")
+    src= [f for f in src  if not f.endswith("once_atomic.cpp")]
+
+
+    setup(
+                name='isaac',
+                version='1.0',
+                description="Input-specific architecture-aware computations",
+                author='Philippe Tillet',
+                author_email='ptillet@g.harvard.edu',
+                license='MPL 2.0',
+                packages=["isaac"],
+                ext_package="isaac",
+                ext_modules=[Extension(
+                    '_isaac',src,
+                    extra_compile_args= ['-Wno-unused-function', '-Wno-unused-local-typedefs'],
+                    extra_link_args=['-Wl,-soname=_isaac.so'],
+                    undef_macros=[],
+                    include_dirs=include,
+                    libraries=['OpenCL', 'isaac']
+                )],
+                cmdclass={'build_py': build_py, 'build_ext': build_ext_subclass},
+                classifiers=[
+                    'Environment :: Console',
+                    'Development Status :: 1 - Experimental',
+                    'Intended Audience :: Developers',
+                    'Intended Audience :: Other Audience',
+                    'Intended Audience :: Science/Research',
+                    'License :: OSI Approved :: MIT License',
+                    'Natural Language :: English',
+                    'Programming Language :: C++',
+                    'Programming Language :: Python',
+                    'Programming Language :: Python :: 3',
+                    'Topic :: Scientific/Engineering',
+                    'Topic :: Scientific/Engineering :: Mathematics',
+                    'Topic :: Scientific/Engineering :: Physics',
+                    'Topic :: Scientific/Engineering :: Machine Learning',
+                ]
+    )
+
+if __name__ == "__main__":
+    main()

tests/android/CMakeLists.txt

@@ -1,4 +1,4 @@
-include("${CMAKE_MODULE_PATH}/android.apk.cmake" REQUIRED)
+include("${CMAKE_MODULE_PATH}/android/apk.cmake" REQUIRED)
 
 # Sources
 include_directories(${CMAKE_SOURCE_DIR}/include)